How to Work as a CRNA 1099 Independent Contractor: In-Depth Guide
April 21, 2025
April 21, 2025

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Recruitment

Trading the comfort of a W-2 for the autonomy of a 1099 might sound like a bold move, but for Certified Registered Nurse Anesthetists, it’s becoming a strategic career shift.

As more CRNAs opt for independent contractor roles, questions around taxes, contracts, and liability aren’t just common—they’re critical.

This guide breaks down everything you need to know to work confidently and compliantly as a 1099 CRNA, from navigating IRS rules to negotiating smarter contracts.

What Is the 1099 Independent Contractor Status for CRNAs?

Certified Registered Nurse Anesthetists (CRNAs) have the option to work as 1099 independent contractors instead of as traditional W-2 employees, meaning they provide anesthesia services under contract to healthcare facilities rather than joining their payroll. This arrangement affects taxes and benefits but not your scope of practice or clinical authority.

As a 1099 provider, you’re considered a business owner by the IRS, responsible for handling your own taxes, insurance, and other logistical tasks that are typically managed by an employer.

That has its own advantages – just watch the clip below.

Over the past few years, interest in independent contracting has grown. According to a survey by the American Association of Nurse Anesthesiology (AANA), about 20% of CRNAs reported working as independent contractors in 2023, reflecting a trend toward greater autonomy and earning potential.

However, the shift from W-2 to 1099 should be a carefully weighed decision. While you may gain more control and higher gross pay, you’ll also assume increased responsibilities for taxes, insurance, and overall business management. Before making the change, it’s important to assess how the 1099 status aligns with your personal and financial goals.

Key Differences Between 1099 and W-2 Employment for CRNAs

When deciding between 1099 and W-2, it’s critical to understand the core distinctions in taxes, benefits, and legal protections. Under a W-2 arrangement, your employer withholds income taxes and covers part of your Social Security and Medicare (FICA) costs. By contrast, 1099 CRNAs receive pay without any taxes withheld and must cover the full 15.3% self-employment tax for Social Security and Medicare, as outlined by the IRS.

While W-2 employees benefit from employer-sponsored retirement plans, health insurance, and paid time off, 1099 contractors must purchase their own benefits, often at significant cost. This shift to self-management requires proactive planning. It also changes job security: employees typically have certain protections under labor laws and are eligible for unemployment insurance, whereas a 1099 contractor is not.

However, 1099 CRNAs generally have more control over scheduling and sometimes earn higher base pay than W-2 counterparts, as indicated by data from AANA.

Other sources show that the average salary for W2 nurses is $238,000 per year, while 1099 CRNAs make an average of $259,707.

In short, W-2 work offers stability with a built-in support structure, while 1099 contracting promises increased autonomy and potentially higher compensation. Choosing the best fit requires balancing the benefits of control and growth potential against the costs and risks that come with self-employment. Here’s an overview of the pros and cons:

Advantages of 1099 Status for CRNAs

A chief motivation for pursuing 1099 status is higher earning potential. Facilities acknowledge that contractors must pay all their own benefits and taxes, so they often set higher hourly rates. Over a year, this premium can translate into thousands more in income. Independent contractors can also choose to take on additional contracts or locum tenens assignments.

Another significant upside involves tax benefits and deductions. As an independent contractor, you can deduct many business-related expenses—such as malpractice insurance premiums, travel costs for work, continuing education, and licensing fees—from your taxable income.

These deductions can substantially lower your effective tax burden. Meanwhile, 1099 work also grants freedom in scheduling. If you prefer certain types of cases or specific travel periods, you have more latitude to plan accordingly. This autonomy fosters a sense of entrepreneurship and control over your professional trajectory.

Finally, 1099 CRNAs can gain broader experience by working across different facilities, potentially expanding their clinical skills and professional network. Some individuals appreciate the variety and independence that come with choosing where and how they practice.

Potential Drawbacks of Being an Independent CRNA

While independence can be appealing, 1099 CRNAs face certain drawbacks that must be weighed. One is the total loss of employer-provided benefits. For instance, health insurance for a family can run about $25,500 per year (the current average premium cited by the Kaiser Family Foundation), a cost that used to be partially covered by many employers. 

Source

Retirement contributions must also be self-funded, and you’ll have no paid vacation or sick days—unpaid time off means a direct hit to income.

In addition, the self-employment tax stands at 15.3% of net earnings, covering both the “employee” and “employer” portions of Social Security and Medicare, according to the IRS. For CRNAs earning $200,000, that can mean roughly $15,000 more in taxes compared to W-2 employment.

Administrative and compliance burdens also increase since you’ll handle your own bookkeeping, quarterly tax filings, and any legal or licensing fees. There is less job security, too: if a facility decides to end its contract, you have no unemployment insurance or formal HR protections.

Lastly, you must buy malpractice insurance personally, which can cost several thousand dollars annually. While essential for any anesthesia provider, these extra expenses and responsibilities can feel daunting if you don’t plan accordingly.

Tax Obligations and Deductions for 1099 CRNAs

As a 1099 CRNA, you handle federal income tax, potential state/local income taxes, and the full 15.3% self-employment tax (covering Social Security and Medicare). Since no tax is withheld from your pay, you should make quarterly estimated payments.

Missing these can lead to IRS penalties, so setting aside 30–40% of each check in a dedicated account is a common strategy. If you form an S-Corp, you’ll additionally run payroll for yourself, filing required returns (like Form 941 quarterly) and paying payroll taxes.

The upside to these responsibilities is the chance to write off legitimate business expenses and reduce your taxable income. For example, malpractice insurance premiums are fully deductible, a key advantage given that a CRNA malpractice claim can cost around $350,000 on average to resolve, along with about $43,000 in legal fees.

Other common deductions include health insurance premiums for you and your family (if you aren’t eligible for a spouse’s employer plan), travel costs to temporary work locations or conferences (including airfare, lodging, and 50% of meals), licensing fees, professional association dues, home-office expenses (if you maintain a dedicated workspace), and continuing education. 

If you have a home office, you can use the simplified or actual-expense method to deduct a portion of utilities, mortgage interest, or rent based on the percentage of your home used exclusively for business.

Vehicle-related expenses for business travel—such as driving between multiple work sites—can be deducted either using actual costs or the standard mileage rate (currently $0.67 per mile in 2024). Keeping good records is vital since the IRS requires documentation for any claimed deductions.

A systematic approach is best: maintain a separate business checking account, use a credit card exclusively for business expenses, and consider bookkeeping software that tracks income and expenses. With consistent recordkeeping, you’ll be better prepared to make your quarterly tax payments, file accurate returns, and, if needed, show documentation in an audit.

Business Structure Considerations for 1099 CRNAs

When practicing independently, choosing a business structure helps define your legal and tax framework. Many CRNAs start as sole proprietors, which requires no extra formation paperwork. However, sole proprietors bear unlimited personal liability for the business and don’t gain certain tax benefits.

Forming an LLC (Limited Liability Company) can shield personal assets if there are lawsuits or debts unrelated to direct malpractice (though malpractice suits generally still target you individually). A single-member LLC is taxed like a sole proprietorship by default, but it provides a corporate “veil” for non-clinical liabilities.

For potentially larger tax savings, some CRNAs create an LLC or corporation and then elect S-Corp status, which can reduce how much of your income is subject to self-employment (payroll) taxes. Under an S-Corp, you receive a W-2 “reasonable salary,” and any additional profit can be paid out as a distribution, which is not subject to Social Security and Medicare taxes. This arrangement may save thousands of dollars per year for higher-earning CRNAs. 

The tradeoff is increased bookkeeping and payroll reporting, plus the need to justify your W-2 wage to the IRS as “reasonable.” For many CRNAs earning well over $100,000 in net profits, the S-Corp route often proves cost-effective despite the extra administrative tasks.

Whichever entity you choose, separate your personal and business finances to preserve any liability protection. Also, consult a CPA or tax advisor well-versed in self-employed healthcare structures, as state-specific rules and fees can influence the best choice.

Retirement Planning for 1099 CRNAs

W-2 employees often enjoy employer-sponsored 401(k) plans with matching contributions. In 1099 practice, you must handle retirement savings independently, but self-employed CRNAs can often contribute far more than W-2 employees by using specialized accounts.

A Solo 401(k), also called an individual 401(k), allows “employee” elective deferrals of up to $23,000 in 2024 for individuals under age 50, with an additional catch-up contribution of $7,500 permitted for those aged 50 or older.

Additionally, an “employer” profit-sharing portion can be contributed, up to 25% of compensation. The total combined limit (including employee deferrals, employer contributions, and any catch-up amounts) for 2024 is capped at $69,000, or $76,500 for participants aged 50 and above.

Similarly, a SEP-IRA allows contributions of up to 25% of the individual's compensation, with a maximum limit of $69,000 in 2024. Unlike the Solo 401(k), SEP-IRAs do not allow elective employee deferrals or catch-up contributions; all contributions must be made by the employer. These retirement plans can be set up through most major brokerages, offering independent contractors a straightforward and tax-advantageous method to maximize their retirement savings.

If you’re operating as an S-Corp, contributions to a Solo 401(k) are calculated from your W-2 wages. If you remain a sole proprietor or single-member LLC, they’re based on your net Schedule C profits. Either way, these contributions may substantially reduce your taxable income while boosting your long-term retirement security.

You can also add a traditional or Roth IRA on top (though IRA limits are relatively modest, at $7,000 for most individuals in 2024). Because you no longer have an employer match, budgeting regular contributions is important so you don’t let higher immediate earnings overshadow your future retirement needs.

Insurance and Liability for CRNA 1099 Independent Contractors

A major shift in going 1099 is the obligation to carry your own insurance. First and foremost, independent CRNAs must have a professional liability (malpractice) insurance policy. W-2 employees often rely on their institution’s coverage, but a 1099 contractor is generally not covered by the facility’s workers’ comp or malpractice.

You’ll need adequate malpractice limits—commonly $1 million to $3 million—and must decide between occurrence vs. claims-made policies. Occurrence coverage typically costs more but saves you from purchasing a tail policy later. 

You’ll also need health insurance since no employer will subsidize premiums, and you may want disability insurance—especially an own-occupation policy—because you’re not covered by an employer plan if you become unable to work.

For a family, the overall cost of health insurance can be significant, as noted, but is partially mitigated by tax deductions if you meet IRS criteria for self-employed health insurance. Life insurance, meanwhile, may be critical if you have dependents, though it isn’t deductible. Consider general liability coverage or an umbrella policy for non-malpractice risks. Finally, be aware that as a contractor, you lack access to workers’ compensation. If you’re injured on the job, you’ll rely on your own health and disability insurance.

Be sure to review contract clauses that detail insurance requirements. Some facilities mandate additional coverage levels or certain policy types. Keep track of renewal deadlines, maintain documentation of coverage, and confirm that any indemnification clauses in your contracts do not exceed the scope of your malpractice policy.

Legal Considerations and Contract Negotiations for CRNA 1099

Because 1099 CRNAs rely on contract law rather than employee protections, carefully negotiating and reviewing your contract is vital.

Begin by confirming it clearly states you are an independent contractor, detailing that you handle your own taxes and benefits. Then, ensure the scope of work—such as what services you’ll provide, hours, and call responsibilities—is precisely spelled out so you aren’t caught performing duties beyond your agreement.

Here's how to negotiate a contract effectively:

Compensation details should specify your pay rate, frequency of payment, and whether any travel or lodging costs are reimbursed. Given that you’re covering your own insurance, pension, and administrative costs, you want a rate high enough to offset these expenses.

Make sure the termination clause provides a reasonable notice period—often 60 or 90 days—so you aren’t abruptly left without work if the contract ends.

Pay particular attention to non-compete clauses. While a survey found that about 60.7% of practicing CRNAs do not have non-compete clauses in their contracts, nearly 9.1% were unsure if their agreements contained these restrictions.

States vary on enforceability of non-competes, but you should negotiate any clause that significantly limits your future work, particularly if it spans many miles or multiple years. Also, look carefully at malpractice and indemnification provisions. Some contracts require you to indemnify the hospital for any malpractice suits, so confirm your own insurance is adequate and that you are not forced to assume liability unrelated to your own negligence.

If you have doubts about specific contract sections—especially legal or financial terms—consult an attorney or CRNA-savvy financial advisor. Even a single unfavorable clause can expose you to significant risk down the line.

Once you finalize the contract, adhere to its obligations meticulously, documenting everything, including hours worked, invoices submitted, and any changes made in writing. With these measures in place, you can confidently approach each assignment, focusing on patient care rather than worrying about contractual pitfalls.

Are You Ready for 1099 CRNA Status?

Pursuing a 1099 career as a CRNA brings the promise of higher earnings, scheduling autonomy, and the satisfaction of running your own practice. Yet it also demands more accountability: from paying quarterly self-employment taxes to purchasing and managing your own health benefits and malpractice insurance.

To succeed long-term, you’ll need a well-structured tax plan—possibly an S-Corp setup for extra savings—a robust retirement strategy through tools like a Solo 401(k) or SEP-IRA, comprehensive insurance coverage, and thorough contract negotiations that protect your interests.

Many CRNAs thrive in this model, enjoying both financial advantages and professional freedom. If you prepare diligently, maintain organized records, and enlist the right professionals (attorney, CPA, financial planner) to guide you, a 1099 path can be an excellent way to shape your anesthesia career on your own terms.

If you’re looking to hire CRNAs or start your journey as a 1099 CRNA, contact us to see how we can help.

Frequently Asked Questions

How much can a 1099-CRNA make?

A 1099-CRNA typically earns between $200,000 to over $300,000 annually, with many earning significantly more due to higher hourly rates compared to W-2 positions. Income varies based on location, specialty, and work schedule.

What tax write-offs can a 1099 CRNA take?

A 1099 CRNA can deduct numerous expenses, including malpractice insurance premiums, licensing and certification fees, continuing education costs, travel expenses, health insurance premiums, retirement contributions, and home office expenses. Tracking these deductions accurately helps significantly reduce taxable income.

Is becoming a 1099-CRNA worth it?

Working as a 1099-CRNA can be highly rewarding financially and professionally due to greater earning potential and flexibility. However, it requires managing additional responsibilities such as self-employment taxes, insurance, and benefits that are typically handled by employers in W-2 positions.

What is the highest paying state for a CRNA?

Massachusetts is currently the highest-paying state for CRNAs, offering an average annual salary of approximately $272,510, closely followed by Montana, New York, and California at around $250,000 per year. Salaries vary considerably based on regional cost of living, healthcare demands, and provider shortages.

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